Publications

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2008

  1. Yang, H., Nenadic, G., & Keane, J. A. (2008). Identification of transcription factor contexts in literature using machine learning approaches. In BMC Bioinformatics|BMC Bioinform.. (Vol. 9). BioMed Central. DOI: 10.1186/1471-2105-9-S3-S11. Publication link: 7607fa8a-e0e7-4dd9-a1f5-6032eef3b793
  2. Zeng, X. J., Goulermas, J. Y., Liatsis, P., Wang, D., & Keane, J. A. (2008). Hierarchical fuzzy systems for function approximation on discrete input spaces with application. IEEE Transactions on Fuzzy Systems, 16(5), 1197-1215. DOI: 10.1109/TFUZZ.2008.924343. Publication link: 6ff2ba39-6ddf-45c5-9291-2c66209877ff
  3. Stivaros, S., Nenadic, G., Zeng, X., Keane, J., & Jackson, A. (2008). Decision support system for treatment planning and outcome prediction in aneurysmal subarachnoid haemorrhage. Poster session presented at Computer Assisted Radiology and Surgery 2008, Barcelona, .. Publication link: 5dd887c5-d2ef-48ee-97e3-1f7c0178f34f
  4. Stivaros, S., Nenadic, G., Zeng, X., Keane, J., & Jackson, A. (2008). Computational Treatment Prediction of Subarachnoid Haemorrhage. Poster session presented at British Society of Neuroradiologists (BSNR) 2008, Manchester, .. Publication link: 8f2f743c-d075-4572-ac63-1ec6a563963e
  5. Cao, X. B., Qiao, H., & Keane, J. (2008). A low-cost pedestrian-detection system with a single optical camera. IEEE Transactions on Intelligent Transportation Systems, 9(1), 58-67. [4391026]. DOI: 10.1109/TITS.2007.909239. Publication link: 86652750-5a44-44c2-bb1d-19c98af99f8c
  6. Yiapanis, P., Haglin, D. J., Manning, A. M., Mayes, K., & Keane, J. (2008). Variable-grain and dynamic work generation for minimal unique itemset mining. In Proceedings - IEEE International Conference on Cluster Computing, ICCC|Proc. IEEE Int. Conf. Cluster Comput. ICCC. (pp. 33-41). IEEE. DOI: 10.1109/CLUSTR.2008.4663753. Publication link: e85a9652-d7b9-40f0-b40e-4ab9754844fd
  7. Wang, D., Zeng, X. J., & Keane, J. A. (2008). An incremental construction learning algorithm for identification of T-S fuzzy systems. In IEEE International Conference on Fuzzy Systems|IEEE Int Conf Fuzzy Syst. (pp. 1660-1666). IEEE. DOI: 10.1109/FUZZY.2008.4630594. Publication link: db7cebc6-f85c-4ba0-8cab-95145acb0741
  8. Yang, H., Nenadic, G., & Keane, J. A. (2008). Identification of transcription factor contexts in literature using machine learning approaches. BMC Bioinformatics, 9(3), [S11]. DOI: 10.1186/1471-2105-9-S3-S11. Publication link: a68d5907-218c-40ae-abd4-a77a259f91d0
  9. Zhao, L. (2008). Patterns, symmetry, and symmetry breaking. Communications of the ACM, 51(3), 40-46. DOI: 10.1145/1325555.1325564. Publication link: 6f108055-ced8-4532-b4f5-15fe5c2cd914
  10. De La Hidalga, A. N., Liping, Z., & Falcone Sampaio, P. R. (2008). A domain engineering approach for the development of tendering e-marketplace applications. In Proceedings - International Conference on Computer Science and Software Engineering, CSSE 2008|Proc. - Int. Conf. Comput. Sci. Softw. Eng., CSSE. (Vol. 4, pp. 927-933). China: IEEE Computer Society. DOI: 10.1109/CSSE.2008.1521. Publication link: 56fdcc12-8451-43c2-b072-a8ee2e12ece9
  11. Kaldis, E., Zhao, L., & Snowdon, B. (2008). Strategic Knowledge Representation for the Modular Organization Reliability. In 7th IEEE International Conference on Cybernetic Intelligent Systems, September 9-10, 2008, Middlesex University, London, U.K. Proceedings. (pp. 139-144). Publication link: 9b09b0fb-cd9d-4269-a5cf-f3777b0a0f2d
  12. Zhao, L., Macaulay, L., Adams, J., & Verschueren, P. (2008). A pattern language for designing e-business architecture. Journal of Systems and Software, 81(8), 1272-1287. DOI: 10.1016/j.jss.2007.11.717. Publication link: 2991d7fb-3d0b-491e-8a62-090c30b70dbc
  13. Zhao, L., & Macaulay, L. (2008). Services Science at Manchester: Bringing People, Business and Technology Together. In Service Science, Management and Engineering Education for the 21st Century. (pp. 199-206). USA: Springer Verlag. . Publication link: 1e86480c-e448-48a4-88f3-d5b937de4ff7
  14. Xi, C., Harbulot, B., & Gurd, J. R. (2008). A synchronized block join point for AspectJ. In FOAL'08 - Proceedings of the 7th Workshop on Foundations of Aspect-Oriented Languages, Held at the 7th International Conference on Aspect-Oriented Software Development|FOAL - Proc. Workshop Found. Asp.-Oriented Lang., Int. Conf. Aspect-Oriented Softw. Dev.. (pp. 39). ACM. DOI: 10.1145/1394496.1394501. Publication link: 481fb120-fefd-4b3b-9bbe-6f631a1a7ad7
  15. Lau, K. K., & Ntalamagkas, I. (2008). A compositional approach to active and passive components. In EUROMICRO 2008 - Proceedings of the 34th EUROMICRO Conference on Software Engineering and Advanced Applications, SEAA 2008|EUROMICRO - Proc. EUROMICRO Conf. Softw. Eng. Adv. Appl., SEAA. (pp. 76-83). Ieee Computer Soc. DOI: 10.1109/SEAA.2008.39. Publication link: d44c1a14-4852-4042-b07c-be661660a075
  16. Buttari, A., Dongarra, J., Kurzak, J., Luszczek, P., & Tomov, S. (2008). Using mixed precision for sparse matrix computations to enhance the performance while achieving 64-bit accuracy. ACM Transactions on Mathematical Software, 34(4), [17]. DOI: 10.1145/1377596.1377597. Publication link: 595789b1-99af-43c4-a92f-1128233849e9
  17. Seymour, K., You, H., & Dongarra, J. (2008). A comparison of search heuristics for empirical code optimization. In Proceedings - IEEE International Conference on Cluster Computing, ICCC|Proc. IEEE Int. Conf. Cluster Comput. ICCC. (pp. 421-429). IEEE. DOI: 10.1109/CLUSTR.2008.4663803. Publication link: 5642af18-ba68-4465-8a3b-fd7f576d1f26
  18. Dongarra, J. (2008). An overview of high performance computing and challenges for the future. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 5336, pp. 1). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/978-3-540-92859-1_1. Publication link: 56dfdec2-f8b1-441b-bbed-b8edf1dad98b
  19. Dongarra, J., Pineau, J. F., Robert, Y., Shi, Z., & Vivien, F. (2008). Revisting matrix product on master-worker platforms. International Journal of Foundations of Computer Science, 19(6), 1317-1336. DOI: 10.1142/S0129054108006303. Publication link: 6594957a-306d-471f-b399-cdb6a2fd48fb
  20. Alvaro, W., Kurzak, J., & Dongarra, J. (2008). Fast and small short vector SIMD matrix multiplication kernels for the synergistic processing element of the CELL processor. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 5101, pp. 935-944). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/978-3-540-69384-0_98. Publication link: 890cc171-ed3f-4fd2-9f54-1c4ecfc84309
  21. Bubak, M., Albada, G. D. V., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science - ICCS 2008, 8th International Conference, Kraków, Poland, June 23-25, 2008, Proceedings, Part III. In Lecture Notes in Computer Science. (Vol. 5103). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 91174e76-ea1b-4673-8324-26fd9a37b26c
  22. Wyrzykowski, R., Dongarra, J., Karczewski, K., & Wasniewski, J. (Eds.) (2008). Parallel Processing and Applied Mathematics, 7th International Conference, PPAM 2007, Gdansk, Poland, September 9-12, 2007, Revised Selected Papers. In Lecture Notes in Computer Science. (Vol. 4967). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 90d192a8-1667-42ab-ad59-0357b9c39c7a
  23. Kurzak, J., Buttari, A., Luszczek, P., & Dongarra, J. (2008). The PlayStation 3 for high-performance scientific computing. Computing in Science and Engineering, 10(3), 84-87. [4488070]. DOI: 10.1109/MCSE.2008.85. Publication link: 12a3ec41-5eb9-47c6-aa18-da4db5f1a6fb
  24. Di Martino, B., Kranzlmüller, D., & Dongarra, J. (2008). Special section: Grid computing and the message passing interface. Future Generation Computer Systems, 24(2), 119-120. DOI: 10.1016/j.future.2007.06.002. Publication link: 1cc73b19-efa1-4ac8-843b-0c51fcd683a7
  25. Lastovetsky, A. L., Kechadi, M. T., & Dongarra, J. (Eds.) (2008). Recent Advances in Parallel Virtual Machine and Message Passing Interface, 15th European PVM/MPI Users' Group Meeting, Dublin, Ireland, September 7-10, 2008. Proceedings. In Lecture Notes in Computer Science. (Vol. 5205). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 170bb08c-cc7f-47f8-ad42-1a4d4deb9032
  26. Kurzak, J., Buttari, A., & Dongarra, J. (2008). Solving systems of linear equations on the CELL processor using Cholesky factorization. IEEE Transactions on Parallel and Distributed Systems, 19(9), 1175-1185. DOI: 10.1109/TPDS.2007.70813. Publication link: 20a2edab-e04a-4555-a9e1-b8d67dacaab6
  27. Chen, Z., & Dongarra, J. (2008). Algorithm-based fault tolerance for fail-stop failures. IEEE Transactions on Parallel and Distributed Systems, 19(12), 1628-1641. DOI: 10.1109/TPDS.2008.58. Publication link: 201bf2ad-381a-4ebd-8ac9-e2ec575b7264
  28. Buttari, A., Langou, J., Kurzak, J., & Dongarra, J. (2008). Parallel tiled QR factorization for multicore architectures. In Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. (Vol. 4967, pp. 639-648). (Lecture Notes in Computer Science). Springer Verlag. DOI: 10.1007/978-3-540-68111-3_67. Publication link: 1f8e4328-cc24-4983-a4a1-32b66c6bcfa4
  29. Bubak, M., Albada, G. D. V., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science - ICCS 2008, 8th International Conference, Kraków, Poland, June 23-25, 2008, Proceedings, Part I. In Lecture Notes in Computer Science. (Vol. 5101). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 204d626b-dced-40a8-9f54-397feda44b68
  30. Dongarra, J., Graybill, R., Harrod, W., Lucas, R., Lusk, E., Luszczek, P., ... Tikir, M. (2008). DARPA's HPCS Program: History, Models, Tools, Languages. Advances in Computers, 72, 1-100. DOI: 10.1016/S0065-2458(08)00001-6. Publication link: 1f4d89e9-5f13-44d0-b68b-98d709f7402c
  31. Dongarra, J., Golub, G. H., Grosse, E., Moler, C., & Moore, K. (2008). Netlib and NA-Net: Building a scientific computing community. IEEE Annals of the History of Computing, 30(2), 30-41. DOI: 10.1109/MAHC.2008.29. Publication link: 4a888adb-8a49-4a4a-a865-e2d26381b4cb
  32. Bubak, M., Albada, G. D. V., Dongarra, J., & Sloot, P. M. A. (Eds.) (2008). Computational Science - ICCS 2008, 8th International Conference, Kraków, Poland, June 23-25, 2008, Proceedings, Part II. In Lecture Notes in Computer Science. (Vol. 5102). (Lecture Notes in Computer Science). Springer Verlag. . Publication link: 30463005-55d4-4aa2-be2b-14e43ede7e69
  33. Chen, Z., & Dongarra, J. (2008). A scalable checkpoint encoding algorithm for diskless checkpointing. In Proceedings of IEEE International Symposium on High Assurance Systems Engineering|Proc. IEEE Int. Symp. High Assur. Syst. Eng.. (pp. 71-79). IEEE Computer Society. DOI: 10.1109/HASE.2008.13. Publication link: 2a180bc8-2def-4302-aa90-f459eaa3fb82
  34. Dongarra, J., & Tourancheau, B. (2008). Special section: Cluster and computational grids for scientific computing. Future Generation Computer Systems, 24(1), 30. DOI: 10.1016/j.future.2007.03.005. Publication link: f17333b8-8fb6-4b49-909d-d57da59636e0
  35. Dongarra, J., Pineau, J. F., Robert, Y., & Vivien, F. (2008). Matrix product on heterogeneous master-worker platforms. In Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP|Proc ACM SIGPLAN Symp Prins Pract Parall Program PPOPP. (pp. 53-62). ACM. . Publication link: f00c4480-a435-409d-bc69-f6bade3a8da2
  36. Dimov, I., Dongarra, J., Madsen, K., Wasniewski, J., & Zlatev, Z. (2008). Special section: Applications of distributed and grid computing. Future Generation Computer Systems, 24(6), 582-584. DOI: 10.1016/j.future.2007.04.014. Publication link: f09a3bf2-f829-4721-87fc-050d94f1b4d4
  37. Dongarra, J., & Haigh, T. (2008). Biographies. IEEE Annals of the History of Computing, 30(2), 74-81. DOI: 10.1109/MAHC.2008.17. Publication link: e9b88f83-3ce6-4117-a638-1bd5f9bc0839
  38. Youseff, L., Seymour, K., You, H., Dongarra, J., & Wolski, R. (2008). The impact of paravirtualized memory hierarchy on linear algebra computational kernels and software. In Proceedings of the 17th International Symposium on High Performance Distributed Computing 2008, HPDC'08|High Perform. Distrib. Comput. - Proc. Int. Symp. High Perform. Distrib. Comput., HPDC. (pp. 141-152). ACM. DOI: 10.1145/1383422.1383440. Publication link: d9936fdd-25e3-42c2-9b89-bd4298f57411
  39. Vömel, C., Tomov, S. Z., Marques, O. A., Canning, A., Wang, L. W., & Dongarra, J. J. (2008). State-of-the-art eigensolvers for electronic structure calculations of large scale nano-systems. Journal of Computational Physics, 227(15), 7113-7124. DOI: 10.1016/j.jcp.2008.01.018. Publication link: db081813-b13e-4678-bc1b-44c221744edc
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