Publications

2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | Complete list


2016

  1. Black, W., Rowley, A., Miwa, M., McNaught, J., & Ananiadou, S. (2016). Text Mining for Semantic Search in Europe PubMed Central Labs. In E. Tonkin, & G. Tourte (Eds.), Working with Text: Tools, Techniques and Approaches for Text Mining. (pp. 111-131). (Chandos Information Professional Series). Cambridge: Chandos. . Publication link: ffd7b522-aa8a-4a87-bbdd-0db96a23a11e
  2. Shardlow, M., Przybyla, P., Batista-Navarro, R. T., Carter, J., McNaught, J., & Ananiadou, S. (2016). Facilitating and promoting web annotation with Argo. In Proceedings of I Annotate 2016.. Publication link: a16570a0-3ae7-479b-a0ea-1b148d93ae64
  3. Thompson, P., Batista-Navarro, R. T., Kontonatsios, G., Carter, J., Toon, E., McNaught, J., ... Ananiadou, S. (2016). Text mining the history of medicine. P L o S One, 11(1), [e0144717]. DOI: 10.1371/journal.pone.0144717. Publication link: a4ba4803-be78-4b32-8ec1-5a98acb2ea41
  4. Thompson, P., Carter, J., McNaught, J., & Ananiadou, S. (2016). Semantically enhanced search system for historical medical archives. In G. Guidi, R. Scopigno, J. C. Torres, & H. Graf (Eds.), 2015 Digital Heritage. (Vol. 2, pp. 387-390). IEEE. DOI: 10.1109/DigitalHeritage.2015.7419530. Publication link: 29baddfd-0d82-42c1-92d6-a0acd4e91f9f
  5. Rehm, G., Uszkoreit, H., Garabik, R., Grobelnik, M., García-Mateo, C., van Genabith, J., ... Daelemans, W. (2016). The strategic impact of META-NET on the regional, national and international level. Language Resources and Evaluation, 50(2), 351-374. DOI: 10.1007/s10579-015-9333-4. Publication link: 4bb2603f-86d5-4452-a550-f8e8c495eb6c
  6. Thompson, P., McNaught, J., & Ananiadou, S. (2016). Customised OCR correction for historical medical text. In G. Guidi, R. Scopigno, J. C. Torres, & H. Graf (Eds.), 2015 Digital Heritage. (Vol. 1, pp. 35-41). IEEE. DOI: 10.1109/DigitalHeritage.2015.7413829. Publication link: 1a80e7c4-9239-4bc9-8fae-c2eb0382f781
  7. Thompson, P., Nawaz, R., McNaught, J., & Ananiadou, S. (2016). Enriching News Events with Meta-knowledge Information. Language Resources and Evaluation, 1–30. DOI: 10.1007/s10579-016-9344-9. Publication link: 8750fd86-3ceb-4823-90c4-1c157980d936
  8. Przybyla, P., Shardlow, M., Aubin, S., Bossy, R., Eckart de Castilho, R., Piperidis, S., ... Ananiadou, S. (2016). Text Mining Resources for the Life Sciences. Database, 2016. DOI: 10.1093/database/baw145. Publication link: 8edb37c2-cec7-411d-902b-6bf8178e12fb
  9. Rehm, G., Uszkoreit, H., Garabik, R., Grobelnik, M., García-Mateo, C., van Genabith, J., ... Daelemans, W. (2016). The strategic impact of META-NET on the regional, national and international level. Language Resources and Evaluation, 50(2), 351-374. DOI: 10.1007/s10579-015-9333-4. Publication link: 4bb2603f-86d5-4452-a550-f8e8c495eb6c
  10. Thompson, P., Carter, J., McNaught, J., & Ananiadou, S. (2016). Semantically enhanced search system for historical medical archives. In G. Guidi, R. Scopigno, J. C. Torres, & H. Graf (Eds.), 2015 Digital Heritage. (Vol. 2, pp. 387-390). IEEE. DOI: 10.1109/DigitalHeritage.2015.7419530. Publication link: 29baddfd-0d82-42c1-92d6-a0acd4e91f9f
  11. Wang, Q., Abdul, S. S., Almeida, L., Ananiadou, S., Balderas-Martínez, Y. I., Batista-Navarro, R., ... Arighi, C. N. (2016). Overview of the interactive task in BioCreative V. Database, 2016, [baw119]. DOI: 10.1093/database/baw119. Publication link: 199c0e58-4cf5-40fc-9827-ffea64f29029
  12. Thompson, P., McNaught, J., & Ananiadou, S. (2016). Customised OCR correction for historical medical text. In G. Guidi, R. Scopigno, J. C. Torres, & H. Graf (Eds.), 2015 Digital Heritage. (Vol. 1, pp. 35-41). IEEE. DOI: 10.1109/DigitalHeritage.2015.7413829. Publication link: 1a80e7c4-9239-4bc9-8fae-c2eb0382f781
  13. Przybyla, P., Shardlow, M., Aubin, S., Bossy, R., Eckart de Castilho, R., Piperidis, S., ... Ananiadou, S. (2016). Text Mining Resources for the Life Sciences. Database, 2016. DOI: 10.1093/database/baw145. Publication link: 8edb37c2-cec7-411d-902b-6bf8178e12fb
  14. Alnazzawi, N., Thompson, P., & Ananiadou, S. (2016). Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain- Specific Terminological Resource. PLoS One., 11(9), [e0162287]. DOI: 10.1371/journal.pone.0162287. Publication link: 8ddb1a3d-bf6f-4aa0-aa34-82bb933777a4
  15. Thompson, P., Nawaz, R., McNaught, J., & Ananiadou, S. (2016). Enriching News Events with Meta-knowledge Information. Language Resources and Evaluation, 1–30. DOI: 10.1007/s10579-016-9344-9. Publication link: 8750fd86-3ceb-4823-90c4-1c157980d936
  16. Batista-Navarro, R. T., Soto, A., Ulate, W., & Ananiadou, S. (2016). Text Mining Workflows for Indexing Archives with Automatically Extracted Semantic Metadata. 471-473. Research and Advanced Technology for Digital Libraries - 20th International Conference on Theory and Practice of Digital Libraries, TPDL 2016, , .DOI: 10.1007/978-3-319-43997-6. Publication link: 89a366f5-4eb5-4434-9fad-d4e08e1f3988
  17. Korkontzelos, I., Azadeh Nikfarjamb, Shardlow, M., Sarkerb, A., Ananiadou, S., & Graciela H. Gonzalez (2016). Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts. Journal of Biomedical Informatics, 62, 148–158. DOI: 10.1016/j.jbi.2016.06.007. Publication link: 70a3f77e-6614-46d5-9467-d4572d518319
  18. Przybyla, P., Nguyen, N., Shardlow, M., Kontonatsios, G., & Ananiadou, S. (2016). NaCTeM at SemEval-2016 Task 1: Inferring sentence-level semantic similarity from an ensemble of complementary lexical and sentence-level features. In Proceedings of the 10th International Workshop on Semantic Evaluation .. Publication link: 681463b9-1bd9-4179-bc75-fcd7044b9c2b
  19. Hashimoto, K., Kontonatsios, G., Miwa, M., & Ananiadou, S. (2016). Topic Detection Using Paragraph Vectors to Support Active Learning in Systematic Reviews. Journal of Biomedical Informatics, 62, 59–65. DOI: 10.1016/j.jbi.2016.06.001. Publication link: dcd353e0-c6e8-42e5-ae42-ae7677e183ab
  20. Thompson, P., Batista-Navarro, R. T., Kontonatsios, G., Carter, J., Toon, E., McNaught, J., ... Ananiadou, S. (2016). Text mining the history of medicine. P L o S One, 11(1), [e0144717]. DOI: 10.1371/journal.pone.0144717. Publication link: a4ba4803-be78-4b32-8ec1-5a98acb2ea41
  21. Shardlow, M., Przybyla, P., Batista-Navarro, R. T., Carter, J., McNaught, J., & Ananiadou, S. (2016). Facilitating and promoting web annotation with Argo. In Proceedings of I Annotate 2016.. Publication link: a16570a0-3ae7-479b-a0ea-1b148d93ae64
  22. Batista-Navarro, R., Hammock, J., Ulate, W., & Ananiadou, S. (2016). A text mining framework for accelerating the semantic curation of literature. In Research and Advanced Technology for Digital Libraries - 20th International Conference on Theory and Practice of Digital Libraries, TPDL 2016, Proceedings. (Vol. 9819, pp. 459-462). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9819). Springer-Verlag, London. DOI: 10.1007/978-3-319-43997-6_44. Publication link: c279c8a8-e87b-4cf0-b97f-61bd66d5a15f
  23. Batista-Navarro, R. T., Carter, J., & Ananiadou, S. (2016). Argo: Enabling the development of bespoke workflows and services for disease annotation. Database: The Journal of Biological Databases and Curation. DOI: 10.1093/database/baw066. Publication link: f6f973f9-77c1-4089-af5d-1932ef468a09
  24. Black, W., Rowley, A., Miwa, M., McNaught, J., & Ananiadou, S. (2016). Text Mining for Semantic Search in Europe PubMed Central Labs. In E. Tonkin, & G. Tourte (Eds.), Working with Text: Tools, Techniques and Approaches for Text Mining. (pp. 111-131). (Chandos Information Professional Series). Cambridge: Chandos. . Publication link: ffd7b522-aa8a-4a87-bbdd-0db96a23a11e
  25. Karystianis, G., Sheppard, T., Dixon, W. G., & Nenadic, G. (2016). Modelling and extraction of variability in free-text medication prescriptions from an anonymised primary care electronic medical record research database.BMC Medical Informatics and Decision Making, 16(1). DOI: 10.1186/s12911-016-0255-x. Publication link: 0833526c-e904-4a5b-8ac6-48d29dba5189 | PubMed:26860263
  26. Milosevic, N., Nenadic, G., Gregson, C., & Hernandez, R. (2016). Disentangling the Structure of Tables in Scientific Literature. In Natural Language Processing and Information Systems: 21st International Conference on Applications of Natural Language to Information Systems, NLDB 2016, Salford, UK, June 22-24, 2016, Proceedings. (Vol. 9612, pp. 162-174). (Lecture Notes in Computer Science; Vol. 9612). Switzerland: Springer Verlag. DOI: 10.1007/978-3-319-41754-7_14. Publication link: 473111c2-52e9-493a-be8c-1a78c5b7ce36
  27. Milosevic, N., Gregson, C., Hernandez, R., & Nenadic, G. (2016). Extracting patient data from tables in clinical literature: Case study on extraction of BMI, weight and number of patients. In Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016). (pp. 223-228). Rome: CitePress. DOI: 10.5220/0005660102230228. Publication link: 5fd42b94-fa5b-43a1-a088-1bb05759c4be
  28. Duck, G., Nenadic, G., Filannino, M., Brass, A., Robertson, D. L., & Stevens, R. (2016). A survey of bioinformatics database and software usage through mining the literature. PLoS ONE, 11(6), [e0157989]. DOI: 10.1371/journal.pone.0157989. Publication link: d48c4b39-7ddb-4c86-ba6c-849b6f8f1a20
  29. Chen, Y., Ponocko, J., Milosevic, N., Nenadic, G., & Milanovic, J. V. (2016). Towards application of text mining for enhanced power network data analytics - Part II: Offline analysis of textual data. In IET Conference Publications. (CP711 ed., Vol. 2016). Institution of Engineering and Technology. . Publication link: a05f82a6-0d52-4a62-90e7-bcafc464437e
  30. Milosevic, N., & Nenadic, G. (2016). As Cool as a Cucumber: Towards a Corpus of Contemporary Similes in Serbian. ArXiv. . Publication link: a723bd68-7ffa-4145-899e-2e77b585ac46
  31. Chen, P., Ponocko, J., Milosevic, N., Nenadic, G., & Milanovic, J. V. (2016). Towards application of text mining for enhanced power network data analytics - Part I: Retrieval and ranking of textual data from the internet. In IET Conference Publications. (CP711 ed., Vol. 2016). Institution of Engineering and Technology. . Publication link: b5929756-b2db-449f-b4bd-f3a7ed2f4b98
  32. Read, W. J., Demetriou, G., Nenadic, G., Ruddock, N., Stevens, R., & Winter, J. (2016). The BioHub Knowledge Base: Ontology and Repository for Sustainable Biosourcing. Journal of Biomedical Semantics, 7, [30]. DOI: 10.1186/s13326-016-0071-3. Publication link: f025c63f-3761-4da2-878c-253aa08bcc96
  33. Wu, Y., Mu, T., Liatsis, P., & John, G. (2016). Computation of Heterogeneous Object Co-embeddings from Relational Measurements. Pattern Recognition. DOI: 10.1016/j.patcog.2016.12.004. Publication link: da6cbd47-c5c5-4151-8d87-ca82d5dec7b1
  34. Gao, X., Mu, T., & Wang, M. (2016). Local voting based multi-view embedding. Neurocomputing, 171, 901-909. DOI: 10.1016/j.neucom.2015.07.043. Publication link: ffc72ade-b026-41ae-9f13-cc33114ba5f9
  35. Goulermas, J. Y., Kostopoulos, A., & Mu, T. (2016). A New Measure for Analyzing and Fusing Sequences of Objects. IEEE Transactions on Pattern Analysis and Machine Intelligence, 38(5), [833-848]. DOI: 10.1109/TPAMI.2015.2470671. Publication link: 6322e42e-63ce-4c1e-9139-444d3e7358cf
  36. Batista-Navarro, R., Hammock, J., Ulate, W., & Ananiadou, S. (2016). A text mining framework for accelerating the semantic curation of literature. In Research and Advanced Technology for Digital Libraries - 20th International Conference on Theory and Practice of Digital Libraries, TPDL 2016, Proceedings. (Vol. 9819, pp. 459-462). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 9819). Springer-Verlag, London. DOI: 10.1007/978-3-319-43997-6_44. Publication link: c279c8a8-e87b-4cf0-b97f-61bd66d5a15f
  37. Batista-Navarro, R. T., Carter, J., & Ananiadou, S. (2016). Argo: Enabling the development of bespoke workflows and services for disease annotation. Database: The Journal of Biological Databases and Curation. DOI: 10.1093/database/baw066. Publication link: f6f973f9-77c1-4089-af5d-1932ef468a09
  38. Batista-Navarro, R. T., Soto, A., Ulate, W., & Ananiadou, S. (2016). Text Mining Workflows for Indexing Archives with Automatically Extracted Semantic Metadata. 471-473. Research and Advanced Technology for Digital Libraries - 20th International Conference on Theory and Practice of Digital Libraries, TPDL 2016, , .DOI: 10.1007/978-3-319-43997-6. Publication link: 89a366f5-4eb5-4434-9fad-d4e08e1f3988
  39. Wang, Q., Abdul, S. S., Almeida, L., Ananiadou, S., Balderas-Martínez, Y. I., Batista-Navarro, R., ... Arighi, C. N. (2016). Overview of the interactive task in BioCreative V. Database, 2016, [baw119]. DOI: 10.1093/database/baw119. Publication link: 199c0e58-4cf5-40fc-9827-ffea64f29029
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